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Zhivan, Natalia A.
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Nolin, Anna Patricia
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Grandson IV, Charles Alexander
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Dotu, Ivan
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Energy parameters and novel algorithms for an extended nearest neighbor energy model of RNA
Integrating chemical footprinting data into RNA secondary structure prediction
Using the Fast Fourier Transform to accelerate the computational search for RNA conformational switches
Complete RNA inverse folding
RNAiFold
Computing folding pathways between RNA secondary structures
Using RNA inverse folding to identify IRES-like structural subdomains